I use two connect IQ data fields when I do running activities. The CORE Body Temperature Monitor DataField and Stryd Zones | Data Field. I noticed on my last run that the data on the two fields was displaying correctly on my watch during the activity. After completion, the activity showed the data captured from each data field (and sensor) in the charts in GCM on my iPhone. However, when I go to view the data on the web version of Garmin Connect, the charts for the data related to those data fields are missing. However, for my cycling activities, when I only use the CORE data field, the chart for the data related to the CORE data field does show in the web version of Garmin Connect.
Looking at the fit file in Golden Cheetah, the data seem to be recorded just fine.